rs259407392 SNP Detail

Summary

• ID
  rs259407392
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:104456072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTATGGTT GTAATGTTTT
  GATCTGTTAT TCTGCCCTTT TGCTTTTGGG TATATGGCGA GGTGATCCAT CATTGTATTT
  CTGTAGAAGC CTCTTCTTTA CTTTATGTAG CTACGGAGTA ATAATCTGGT TAAGGGCATC
  CCCAACTGGA ATAAGTCCCT GCTACTGGAG CCTATATCCT ATAGGTCTCA ACACCACCAT
  Y
  AAGTGGGAAC CATCCTTCAG CATGTGATCC TCTAAGGGCA GGCCATTAGA GTTTGCATCT
  TAGTGGCTTG ATCTGAATGA AGGTCCCTGA ACCAATAATT TGGGGGTGGG GGTGAGGAAA
  AGCCAGATAT AGTCCTAACT AGGCTGATAA ATTGAGCAAG AATGCAGTTT AGAGAGCAAC
  TTGTAGGAGG TGTCAAGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321241263	CHEV_4_104271480	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259407392					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104456072 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596483	regulatory region 596483			980 bp distal
Rr596484	regulatory region 596484			497 bp distal