rs259299448 SNP Detail

Summary

• ID
  rs259299448
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141457509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCCTGCCT CAGCCTCCAG
  AGTGCTAGTA TTAGAGGCAT GAGCTCAATG TCTGTCTGAG CTGTTTGAGC TTTTGAGTCT
  GTTTCAGGAG TTTTTGTGCC TCCAGTCCCA GCAAGCCTAT AATCTTAGCT ACTATGTTAA
  GATGTCTCAT ATAGATCTTT ATTCTTCAAA ATGTTTCCAG AAAGTCTTAT TTTCATTTCA
  C
  GAAAGGAAAC AGAAACGGAT GCTCCAGGGA CTTTAGTTCC CTAAATACAC ACAGTTAGTG
  ACTGGGAGAT GCTAAGAATC TAAAGTCTCA GGTGGAGAGA TGGCTCAGTG GTTAGGATCA
  CACACTGCTC CTGCAAAGGC CAAGTTCAGC TCCCAGAACC CATGAGGGGA CCACATCACA
  ACGGCCTGCC AGTGACTGGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389331	CHEV_4_141286113	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259299448					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141457509 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	within coordinates
Rr603867	regulatory region 603867	647 bp distal
Rr603868	regulatory region 603868	381 bp distal
Rr603869	regulatory region 603869	1554 bp proximal