rs259245314 SNP Detail

Summary

• ID
  rs259245314
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98693397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTAGCAA TTAGGAAGGC
  AGCCACATGA TACAGCCTGA CTCCTGTGGC AGGCAAGCCA GGAAGTCTAG ATCTTAACTC
  AGATTTGCCT GTTGGTTTTT GTTGGTGTTT GTTGGAGTTT AAGGCATATC AGACATTCTT
  AGGCCTTAGT TTCTTCACTC TTTGGTTTCA TAATACTGAT CTAAAACTAT AATCCTAGGC
  R
  CGATATTAAT GAGGTATAAC AGAAGCAGAG TTGCTTTGGT AAAGGTGGGT CACACAAAAG
  AGATGGATTG GGCTAGAGAA ATGGCTCAGA GCATAAGAGT CCCTTTCAGA GGGGTCTGCA
  TGTGGTTCCC ACGCAGGCAG CTCCCAAGCA CCTGTAACTC CAGCTCCAGA CGATGATCAT
  GGCTGCCCAG GGCACTTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321221741	CHEV_4_98471851	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259245314					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98693397 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kank4	KN motif and ankyrin repeat domains 4			Intron
				Noncoding-Transcript-Variant
Rr595791	regulatory region 595791			88 bp distal
Rr595792	regulatory region 595792			44 bp proximal