rs259236931 SNP Detail

Summary

• ID
  rs259236931
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:155599427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCTTTCT TGGCTTCCAG
  AAAACTCAAA ACTCAACAAG ATTGTACACG TGTCCCTCCT CCCACGTGTG TGTGTCTGCT
  TCCCCCACCC CCACTCTTCC CAAATTGAGA AACGACCACA GTCATTTTTA ATCAGGCCAT
  GGCAATACTT CCTCCTAGAT TCTCCCTTGT CTATGTTTTT TTTCCTCTGT CCTAATTGAT
  Y
  TTATGCACAA CAGTAAAAGA AAAAGCAGCC GGGCAGTGGT GGCGCACGCC TTTAATCCCA
  GCACTTGGGA AGCAGAGGCA GGCAAATTTC TGAGTTCTAG GCCAGCCTGG TCTACAGAGT
  GAGTTCCAGG ACAGCCAGGG CTACACAGAG AAACCCTGTC TCATAAAATG AAAAACAAAA
  ACAAACTAAC AAGCAAACAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320575293	CHEV_2_155583243	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259236931					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:155599427 () rs orientation: forward

Symbol	Name	Function Class
Rr568116	regulatory region 568116	1475 bp distal
Rr568117	regulatory region 568117	1563 bp distal
Rr568118	regulatory region 568118	336 bp distal