rs259212367 SNP Detail

Summary

• ID
  rs259212367
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119460508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGATACCAG CAATGTTAGC
  ATAGTTCTCC TACATAGACA AGCAGCACTG TGACTTCTGT AAGCCGAGGG ACAGAGGCGG
  GAGTGAGCGA GTCGCAGCCC TGGGTTCACG TTGGTGGGCT TTGTTTCTGA GGTCACTTTC
  TCCACTAGAA ACCCAGGTTT CCTAGGTCAA CCCATCTTTC CTAGGTCAAC CCATCTTTCC
  S
  GGCAGACAGC TGGAACCCAG GTTGTTGCAG GGTGTGACGG TCCTGTACAC TTTCTAAGCT
  TTAAGCCTGA ACAACAGAAA AGCTGTGCCG TTCCTTTCTC AAGTCACCAA AACCTGCTCT
  GAGTCCCACA CTAGATCTAT CTTCCCTTTC TTTAGGGACA ATACAGATTT CTATTCCCTA
  AAGACAAAGC ATGCAACAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321928139	CHEV_6_119433565	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259212367					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119460508 () rs orientation: forward

Symbol	Name	Function Class
Fbxl14	F-box and leucine-rich repeat protein 14	mRNA-UTR
Rr637693	regulatory region 637693	1232 bp distal
Rr637694	regulatory region 637694	63 bp distal
Rr637695	regulatory region 637695	360 bp distal
Tssr58509	transcription start site region 58509	1984 bp downstream
Tssr58510	transcription start site region 58510	1596 bp downstream
Tssr62723	transcription start site region 62723	1967 bp upstream
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron