rs259110829 SNP Detail

Summary

• ID
  rs259110829
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13152046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTTGACA GGAATAAAGG
  GACAAAATCT AGGAACATGC CTTTAATAGC AGTATACCTG AAGGTGAGGC AGGAGCCTCA
  CCTGGAGTTC AAAGCCAGCT TGTGGACTAC ATTGTAAAAA CCCTGTCTCA AATAGATAAG
  CTAAAGTGGA TAGAAGGAGC ACATAGGCAA GTACTCTGCC TTAAAGAGAT TCTTTTTAGG
  R
  TGTCATTTAT ATGGCTTGGT TATATTCTTA TTTCTCAATG GCATCATAAA ATATAGTCTC
  AACTACCTGG AACACTGTCT CTTTTAATTG ATCAACATTT CCCAATTCAC AGAATAATGG
  AGAAAATTCT GTCTAACCAT ATACTACTCA AGGCAATGTA AACTTCTGAT GAATTCAGTA
  CATCACTACA TCTTTACGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747178	CHEV_6_13102047	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259110829					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13152046 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	153 bp proximal
Rr626557	regulatory region 626557	398 bp proximal