rs258890910 SNP Detail

Summary

• ID
  rs258890910
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:111536807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcacatagc catcactcat atgcataatt
  agtaagaatt aaGGCTGCAA TTAAATATGT GTGGAGTAAC ACCATTCTGT GTCTTTAAAA
  CACATGAAGT AAGTGGGTTG GTTATCCCAT TTCTCTACTG GTGAGCCTGG ccaagaattg
  Y
  tcctctctaa aagaaatgaa gggacaaaat agagcagaga ctgatggaaa ggtcatctag
  agtgaaggga aggaccagcc aacttgggat ccagtccctg ggcaggcact catccctgac
  actattactg atgtgctgtg cttgtaaata                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321906007	CHEV_6_111509840	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258890910					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:111536807 () rs orientation: forward

Symbol	Name	Function Class
Grm7	glutamate receptor, metabotropic 7	Intron
Rr379936	regulatory region 379936	within coordinates
Rr636272	regulatory region 636272	169 bp distal