rs258889311 SNP Detail

Summary

• ID
  rs258889311
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34502840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAACTTAC TTGCAGACAA
  ATTCTATCCT CCTTTAGTCT GTTTTCCTGC TATGACTACA ATAAACTCCC ACAATTTAGT
  ATCATAAAAA ACAAAACAAA ACTAAGCCAC AGTGGTGTAT GTCTGTGGTC CTACTCCAGA
  AGAGACTGAG ACAAGACAAT CACTGGATAG CAGCTATTTG AGATCAGCCT GGGTAGCAGA
  K
  CGAGACCTGT CTCAAAACTA GCAAAACCAA ACCAAGAAAC CATCCTAAAT TATCATCCTG
  TATTATCTTA AAGTTCAGAA TCAGAGATCT CTGCAAAGTT CTGCTGGGCC ATTTTTCCTC
  TGGACATTCT TGGGGGATCT TCTCCTTTCA TCTTCTCAGA CCCCAGGTCT CCAGGCATCC
  TCCACTTGTG GTGTTTTCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701796	CHEV_3_34347613	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258889311					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34502840 () rs orientation: forward

Symbol	Name	Function Class
Gm64637	predicted gene, 64637	within coordinates
Rr575135	regulatory region 575135	1885 bp distal