rs258871748 SNP Detail

Summary

• ID
  rs258871748
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4406412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAAGAGA AGAGAAAGAT
  TAGGAATCTC TTCAGCCAGC ATTATGACTA ACTTTACCAG CATTTCCAGC ATCAAGACCC
  ATCTCTCCCC ATCTAAGCCA TGACTATGGA GAGGCAGATT AGGATAAACC TCACTATTGC
  TGATCCTTCT CTTACCTGTT AATGGATAGT GCTTATCGGA GAGTATAGTT CTTGTGTCAC
  R
  AATCTCACTA AGTGTTGTGT CTCAACTAGA TCACTCATCA TCATCATCAT CATGATACAA
  ACAAATGCAA GACCGCACAC TCATGTCCCC TCCTGCCTCT GGTTGAAGTT CCCGCCTCTT
  TTATACTACA GTGCTACTTA AGATTGCTTG AGTGTGCTGT CTTTACTTTC TCTCTTGAGC
  GTCCTTCGGT CAGGCATCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727393	CHEV_6_4356412	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258871748					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4406412 () rs orientation: forward

Symbol	Name	Function Class
Rr626010	regulatory region 626010	1420 bp proximal
Rr626011	regulatory region 626011	1502 bp proximal