rs258722805 SNP Detail

Summary

• ID
  rs258722805
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13150342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATTGCAAC TTCTCATCTT
  TTATGGTTAT GCTTATTTTG TTTACAGTGA GGATCTGAAA ATGAAACTGT TTTAAGATGT
  TTGCCTGTAA GATGAAATTC TTTCAGCAAG ATCTGTGGCT ACCTTATATG TGTTTCCTAA
  CTTTAATCTC TCAAGTTCAA ACACTCTGAG GGCAATGTTT CTTACCATAA AGAAAATAAA
  W
  GGTCAGACTG TAAACTCATT GAGCATACCT ATTTCATCTG GAATGATAAT ATTTTGGTTT
  TGTATTGATG CTTTAATTTA GAGAGATGAG TCTCAGATGA AATATAAAAA AATAATTGAC
  CTATCTCAAG AAAGGTTTTA AAAAGTCTCC TCTTTGCACT ATCTCCCTAC CTATTCAGTA
  TAGTACTCAA AGTCCTAGCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747152	CHEV_6_13100343	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258722805					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13150342 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	1857 bp proximal