rs258707709 SNP Detail

Summary

• ID
  rs258707709
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:6341327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGGACTTG GAGAAAACAA
  GTGCAAATGA AAACCATTAC TTCTCCAGCT ATATCATAAA CAGCAGACAT CTGAGGGTAC
  CTCATATTTG CTTAAATCCT GAATCATAAT TTGTATGAGT AATGGGCAGG GGAATGGGTA
  CTGTTGTCTA CACAGTCACA GAGAAAGACT GTTTATGGCT TTGATCTTCT GAAATGCTGA
  Y
  CCTCTTTACA TAGATTGAAC TGAAAGACAA ACAAACACAG ACTGGCACAT AGTTCAGTCT
  GTGGAAAAAA AAAATTACTT TGATCCCTGT GAAATAAAGC TGTCTACTGA GAAATTTGGT
  ACATAATTCC CCATTATTAC CAATGAAAGT TAAATGCTTA TTTCTTTTCC TCTAATTGAT
  AATGTTCCAT AGGTAAGCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324226961	CHEV_13_6290537	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258707709					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:6341327 () rs orientation: forward

Symbol	Name	Function Class
Gm35615	predicted gene, 35615	1865 bp upstream
Rr474569	regulatory region 474569	1013 bp proximal