rs258652946 SNP Detail

Summary

• ID
  rs258652946
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:55017357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAA GAAACATCCC TTAAAAAACA
  R
  AACAAACAAA CAAAAAATCC CTAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320774357	CHEV_3_54913858	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258652946					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:55017357 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13184	CpG island 13184	1979 bp proximal
Rr374991	regulatory region 374991	466 bp downstream
Rr576901	regulatory region 576901	620 bp proximal
Rr576902	regulatory region 576902	1682 bp proximal