rs258651670 SNP Detail

Summary

• ID
  rs258651670
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:94487002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCTGAGT GCAGTAGAGA
  CCTAATAGCT GGACCTGTAG TGAAAGGGCC CTAGTGCGGG AACCAGTGTG AGGAACTTGA
  AGACTGGCTA CTTACAGTAT TTGTATTTGT AATTACTCAT GTGAGCAGCT GGTGGCCCTT
  ACATACTGGG TGACTTTGGG GAATGGTTTT CACTGCTGGT TGTTTTCCTG GGTGTTTAGT
  K
  CTCTCATGTC CTTCAGAAGA GGAATTTGTT GTCTCTTTAT CCTCTGTGCC TTATCTCTTA
  TGGAAGAGGT AAAAAAAAAA TCTTTTGATT GATAGTATAC AGAAAGTTTT AAAGCCTCAT
  GTGCAGTTCT GGTAACTTTA GAGCAATAAA GGCAGTTTTC TATTGATCCC TTTGCCCAAA
  ATAGGGTCTC ACTATGTAAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321868781	CHEV_6_94460015	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258651670					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94487002 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr379776	regulatory region 379776			within coordinates
Rr634884	regulatory region 634884			451 bp distal
Slc25a26	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26			Intron
				Noncoding-Transcript-Variant