rs258502726 SNP Detail

Summary

• ID
  rs258502726
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142245190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGGGATCA GAGAAGTGTG
  AACAAAGCAG AAATGATGGG GAAGGGGGTG GAGAGGGGAG GGGGCTCATG GCTGAAGACA
  AGGAGTGGAA GGAGGTGCTG GGAGCCTAGG GCAGGACCTG GGAGGGATGG AACAGCCATC
  CCTACTGGGG CCGAAGAATT TCCATCTGGT CCTGAGGATG GGGTCCCCAC AAGGACTGTT
  A
  CCCCACAAGT AAGTAGGGGG AGTAAGTAAA TAATAGGGAA GATGGGGGGG GGCAGAGAAA
  AAAGGAGGGA AGAGGGAGTC AGGGAGAGAG GAGAGAGTCA GGGAGGGAGG AGGGAGTCAG
  GGAGGGAGGA GGGAGAGAGT AGAGAAGAGA GGGGGGAAGA AGGGAGGGAG GGAGAGAGAG
  GAAGAGCACT GATCACTTTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321396737	CHEV_4_142108523	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258502726					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142245190 () rs orientation: forward

Symbol	Name	Function Class
Gm70299	predicted gene, 70299	within coordinates
Rr604088	regulatory region 604088	607 bp distal
Rr604089	regulatory region 604089	1423 bp proximal