rs258403884 SNP Detail

Summary

• ID
  rs258403884
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:17979048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGG GAATTTTCCC AAGTCCTGTG
  W
  GAGCATGCAC AGATACCTGA GTGGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322114471	CHEV_7_18830472	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258403884					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17979048 () rs orientation: forward

Symbol	Name	Function Class
Mill1	MHC I like leukocyte 1	224 bp upstream
Rr642879	regulatory region 642879	955 bp distal
Tssr64734	transcription start site region 64734	79 bp upstream
Tssr64735	transcription start site region 64735	112 bp upstream
Tssr64736	transcription start site region 64736	262 bp upstream