rs258266373 SNP Detail

Summary

• ID
  rs258266373
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106797529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACAAAAA TGGTCACACA
  AAATTGAGGG GTTCAAAATA TTATTTATAA GAAACTTATG AGGTCCCAAG GATCTTTGGA
  CCTTGGAACA TTCAAGGTTC TGCCTTCTGC CCTTGTCTTT CTTCAAGTGT GTGAATATGT
  AATCTTTCAT CCATCATCCA CACCTACAAG TGAGTCACCC ACACAGACTG TGCGTCAGGA
  R
  GACCTGTGAT ATATGGATGG ACAAAAGACA GTGTGCTCCT ACATGATTTA TAGAAATTCA
  CCAAGGTACT CAAAAGTGTG TCCTGAAGCT CACCTAAACC AGGATGCCAG GAATGTTAGA
  TTCCTGTACT TACACATCTA TAGAGGTGGA AAGAAGCAAC CTTGACCTGT GCTTGACCTA
  TGCAATTCAA CAAGCTCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321886892	CHEV_6_106770562	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258266373					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106797529 () rs orientation: forward

Symbol	Name	Function Class
Rr635975	regulatory region 635975	181 bp proximal
Rr635976	regulatory region 635976	1859 bp proximal
Rr635977	regulatory region 635977	1942 bp proximal