rs258205152 SNP Detail

Summary

• ID
  rs258205152
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102342684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGAAAAGT CTAGAAATAA
  ACAGTTCATG AGTTTTAAAT AGCATTTATC ACAGTATTTC TCATCTCAAT AAATTTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGCATGTGT ACACATGCTT GTGCAAGACA
  GAGCTCCACA TTAAATGGCT TCCTTAAGAA CTCTCTGCTT TATTTCTCAG CACCAGGTCT
  G
  TCTGCAAACC TGGGCTTCAC CGATGTGTGT TGACGAGCTG GCCAGTGAGC TTTCGGGACT
  TGCTTCAGTA CTTCCGGTGC TGGAATTACA GCTGTGACCC TGCACTTACT TTTTCACAGA
  GGTGCTTCAG CTCCAGAGTC TGATCTCTGT GTTTTCACAT AAAGAATGTA TATCCACAGG
  GCTATGTCTC CATTTCTCCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321233794	CHEV_4_102158092	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258205152					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102342684 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pde4b	phosphodiesterase 4B, cAMP specific			Intron
				Noncoding-Transcript-Variant
Rr596250	regulatory region 596250			1790 bp distal
Rr596251	regulatory region 596251			416 bp distal
Rr596252	regulatory region 596252			469 bp distal
Rr596253	regulatory region 596253			284 bp distal
Rr596254	regulatory region 596254			685 bp proximal
Rr596255	regulatory region 596255			780 bp proximal