rs258187807 SNP Detail

Summary

• ID
  rs258187807
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148082896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGCACATG TGTGCACCCA
  GCACATGGGG AAGCCAGAGG AGGACATTAA GTGTCCCGTT CTAACCCTCT CTGCCATACT
  CCCATAACGC AATGGGCCAA CCCCTTTGCT GTCACGACCC CTTTGATGTT TGGGTTGAAT
  GACCCTTTCA CAGAGGTCAC ATATCAGATA TCCTGCGTAT CAGATATTTG CAGTGTGACT
  Y
  GTAATGGTAG CAAAATTAGT TATGGAGTAG CTGCAAAGTA ATTTTAAAGT TGGAGGTCAC
  TGCAACCCGA GGAACTGCAT TGAAGGCTGA GAATCATTGC TAGAAGTGAG GTCTCTCACT
  GAACCTGAAG TTATTTTTTG TTTGTTTGTT TGTTTGGGCG GGCTAGGCTG GCAGGCAGCA
  AGTTCCAGAG AGTCTCATGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321416316	CHEV_4_147372548	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258187807					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148082896 () rs orientation: forward

Symbol	Name	Function Class
Rr407043	regulatory region 407043	1486 bp proximal
Rr604546	regulatory region 604546	1793 bp proximal