rs258163744 SNP Detail

Summary

• ID
  rs258163744
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143055737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATgggctg gagagatggc tcagtggctg
  agagcactga ctgctctttc agaggatttc agagtacctg ggttcaaatc ctaccaccca
  caagccagct cataactgtg actccagtac caggggatct gatgccctct tctggccccc
  Y
  tgagcaccgt atgtacatgt gcactgatat acatgtaaaa atagcaaaat aatttttaaa
  agacacaaaa caCAGCCACT ATAATAAAAC TTCATGCAGC TTTATTTCCG TGTTTGTTTA
  CTTATTTGTT TATTtgtgtg tgttggtgtc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321404113	CHEV_4_142919070	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258163744					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143055737 () rs orientation: forward

Symbol	Name	Function Class
Rr604198	regulatory region 604198	1315 bp proximal