rs258152569 SNP Detail

Summary

• ID
  rs258152569
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:6290011 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACAGTGGCC AATGGCTGTC GTTTCTCACC
  AAGTGTTCTG TATTTGGAAA GGGTCGGTCC TCCAAGGCTT TCTTCCTGCT CCTTGGTCCA
  ATGTCAGCCA TCTTATCCTC ACTGCCATGG TCTGGAATGT AGCCAGTGAG CTAAGGATTT
  K
  TCCAGTAGAC GGCGCTGTTG TACTCTAGCC TTGCCCACCT GGTAAGAAGG TCCGTCCTCT
  CCGTGGTTCA TCTTAGGTTT TCATAAGGAC TTCAGATATT TGGGTAAGAG Gttgtttttt
  attttgtttt tgttttatgt tttttgtttt                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321731638	CHEV_6_6240011	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258152569					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6290011 () rs orientation: forward

Symbol	Name	Function Class
Gm20619	predicted gene 20619	within coordinates
Rr626230	regulatory region 626230	within coordinates
Rr626231	regulatory region 626231	within coordinates