rs258100917 SNP Detail

Summary

• ID
  rs258100917
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:74793501 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGAGCTAAC CCTCCAAAGA CCTGGTCCAG
  ACCATAACCC TATGAAGTAG ATTCTGCTAG AATTATCCTG AGACGGAGAA ATAGGGCTGA
  GGGTGAGCAA ACTGGTTCAG CAAGGTTTAG GAGGGCGGGG ATACTTGAAT TCTGGTGCGC
  G
  CTGCTTCTAT AAGTGGGTGT TGAGAGTCAG TCAGTATATG CACACCCCGC CATCTTCTCT
  CACTACCAAC TTTTGTTGAG CATCTAATAT GTACCAGCGA CATTTAATAT ACTAGCTGAA
  TTTGGATACT GCTATTACTT GTATACagag                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320348842	CHEV_2_74801214	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258100917					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:74793501 () rs orientation: forward

Symbol	Name	Function Class
Igs15	intergenic site 15	within coordinates
Rr559413	regulatory region 559413	1111 bp proximal
Rr559414	regulatory region 559414	1377 bp proximal
Rr559415	regulatory region 559415	1943 bp proximal