rs258040291 SNP Detail

Summary

• ID
  rs258040291
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141456049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTTTTGT ATTTACATAT
  GAGTGTTTTG CCTGTAGCTA TGTATGTGCA CTGTTTAGGC CTTGTGCCCT CAGAGGTCAG
  AAGAGGAAGT CGGATCCCCT GGAACTGGAG TAAGAGATGG TTGTAAAAGC CAAGCCGGGT
  TTCTTAGTTA GAGGCCAGCC TGGTCTACAA AGTGAGTTCC AGGACAGCCC GGGCTACACA
  A
  AGAAACCCTG TCTCGAAAAA CAAAAACAAA GAGATGGTTG TAAGTCATTA TGTGGGTGCT
  GGGAATTGAA CCCAGGTCCT CAGTAAGAAC AAGAAGTGTT GTTTGTTCAT TTTAAAGCAG
  GATCTACCTA CAGAGCCCTG GATATACTTG AAGAACAAGT ATTCTTAACT GTTGAGCCAT
  CTCTCCAGAC CCCACAAAAT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389326	CHEV_4_141284653	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258040291					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141456049 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	765 bp upstream
Rr603867	regulatory region 603867	330 bp proximal
Rr603868	regulatory region 603868	814 bp proximal