rs257910107 SNP Detail

Summary

• ID
  rs257910107
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52743735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTCTATAA AAGGCCTATA
  TGGTTTTTGA ATACTGAACC TCAGGCTAAC TCTACCGAAA GGTGTTGTGG ACCTGAGGAA
  GATGGACTGG ACGGGGGGGG GGGGGGGGGT CTTTCAGTCA TTGGGGGACT TTGGCCTCTC
  CCTCCTTCTC TTCTGTTTTC TGGCCGTAAG GTAGCATTGA TTCTGCTCCG TGCTCCTGTT
  R
  TTGCTGGCCA GCGTGCCCAC CAGTCACCTG AAGCAACAGG AATACTGATG AGAGCCTAGA
  ACCTCCAAAA GCAGGAGTCA AAACTCACCT GTTCTCTTAA TGAGTTAATT AACTCGAGTC
  TTCTGTTATT GTGGCAAAAA GCAAACAAAG CATAAACGTG AAGCTTCCCT TCCGGATAAA
  GGTGACATGG CATGAATGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765397	CHEV_3_52640236	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257910107					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52743735 () rs orientation: forward

Symbol	Name	Function Class
Gm65956	predicted gene, 65956	within coordinates
Rr576588	regulatory region 576588	558 bp proximal