rs257804421 SNP Detail

Summary

• ID
  rs257804421
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131822273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCTGCCCC ATAATGTATG
  ACTTCTCTTT CACATGATAT ATATTTTTGC CTTTATTTTT ACCTTTCATT GTACTTTCTC
  TTTCTTTTTC TAAAGATTTA TTTATTTACT TTCTGTATAT GAGCACACTA TCTGTCTTCA
  GATGCATCAG ATCCCATTAT AGACCTCTAA AACTGGAAAA ACCAGTGTCC ATGTCCACCC
  Y
  GACTCCCTGA TTTCTCTAAT GCTTTTTCAA TAACGGCCCC CATTTGGAGT GACACACTAA
  AGATTCTCCT CAGAGGAGAG AGAGCAGATT CTCATAAAGG CTGCTGAGGC AATCCCTGGA
  AGAGCCTTGG TGCCTGGCAA ATTCTCCGAG GGAAATAGGG GTCACACCGT GATACTTCCA
  GACTCTGAAA GGAGAATGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321330497	CHEV_4_131650877	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257804421					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131822273 () rs orientation: forward

Symbol	Name	Function Class
Gm13214	predicted gene 13214	664 bp downstream
Rr600873	regulatory region 600873	1456 bp distal
Rr600874	regulatory region 600874	324 bp distal
Rr600875	regulatory region 600875	185 bp proximal