rs257801084 SNP Detail

Summary

• ID
  rs257801084
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17025971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGTTTTA AGCTGAATAT
  TGAGTTGCTC ATTTGTAATC TCAGCAATTC AGAGGTGGAG GCAGGAGGAT TAAGAGTTCA
  CAAAAGGTCA CCATTAGCTA CAGAGCAAGC TTGAAGCCAG CCTGGGATAC ATGACACCTT
  ATGTAAAAAT AAAAACAAAA CAAACAAACA AAAATGTAAG TCAGAATTCT ATCACAAGCC
  S
  CGTTAAAAGA AAACATGGTA AATAAATGCA ACGTGTGAGA GAGGTTCCTT CCTGAGTCCT
  GTAAGATTGG CGTCTACGGT CCATAGCACT AGGGTGTCGG ATGTAGCTAA GCTGCAGATC
  TGTATCCCTG TGTTTTAGGC TGGTCCCACC CAACCGTGCA AATGTCAGTC ACCTACAGAA
  GAGTTGTGTT CACTGCAAGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321753281	CHEV_6_16975972	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257801084					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17025971 () rs orientation: forward

Symbol	Name	Function Class
Rr626745	regulatory region 626745	1653 bp proximal
Rr626746	regulatory region 626746	1768 bp proximal