rs257551000 SNP Detail

Summary

• ID
  rs257551000
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:114255673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTGGGTAA AATTTGAAAA
  CCTATACCCA CATAATGATG CTAGATCTAA TGCTCATTGT TTTCATGTTA TTTTTCTAAT
  TTATATTTTA TTATATGCAT ATATGTATTT TCTAATGTAC ATATTATATA CATTATACTT
  ATATACATAT ATCATAAATA TACACATATA AAGTATAGCA GCACTGTTGC CTTAGTGTTA
  Y
  CTATTTACTT ATAGGTATGC ATGTATATTT TCTTTTTATA GAACTTACCA TATATTCTAC
  ATTTTCTGAG AGATCATGCC TCCCACCACA AGGTTAGGTT AAGTACTCAA AAACTACCTT
  TTTTACTTTT GCCTACATAA AACTATTGAA CATGCTTATA CCATGGGCTC ATTTATTTAT
  CTGAACTGGA GCACATCGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320885159	CHEV_3_114164942	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257551000					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:114255673 () rs orientation: forward

Symbol	Name	Function Class
Rr583527	regulatory region 583527	1699 bp proximal