rs257431839 SNP Detail

Summary

• ID
  rs257431839
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:103829736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGATCTTAC TGCCTTACTC
  TTGTTCTCAG TCCATAGTTG GTACATTTTT CCATCCTTAA AGACTTTAGA ATATAGAGAA
  CGTATAGAGT AATTATCAAG GTCAGATGAT AGTGGGAGAA GTGTTTCACA TTGGTAGGAA
  TTTTTTGAAT GAATTGTTTC TGAGAGCCTC CTACCTGTAT TCATAGAAGT TAAATTTAAA
  R
  GATGTAAGTT TGATGAAAAG ATAAATCTCT CCTCTCCCCC TCTACCCCCT CCCCTCCCCT
  CCCCTTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
  GACAAGATCT TATATAGCCC AGGTTGGCCT TCAACTCTAT ATATTGCTGA AGATGACTTC
  CAACTTTTGA TGCCCCTGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320443514	CHEV_2_103839548	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257431839					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103829736 () rs orientation: forward

Symbol	Name	Function Class
4931422A03Rik	RIKEN cDNA 4931422A03 gene	Intron
Rr397165	regulatory region 397165	1855 bp upstream
Rr562001	regulatory region 562001	1800 bp proximal
Rr562002	regulatory region 562002	1887 bp proximal