rs257300721 SNP Detail

Summary

• ID
  rs257300721
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101531558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTTGCTA TCTCGTGTGT
  AATTACTTCC TCTAGATTGA AAACATTCAC TCCTGGAGGG GTGCTCCCAT AGACCTAAGA
  AGAAAACACA ACTCACAAAT CTCAGAAAGT TCCTGAAAAT TTCAAGATTC ATGCTCCCCT
  ACCCTCAAGA CTATATAAGC AGTAACAATT TCAGGAGGTT CTGTGTAAAT CTCCCTCAGG
  R
  TGCTCAGGGA GGCAGCTTTC ATGAGCTGTC ACCCCTGTTG GGTAGGTTTT GGTGTTGCAC
  CTGACTTCCC CGTCATCCAT ACTCCAGTAG GTAACTGCTC ACCTGCGCTC TGTAAGGAAC
  CTCGATGCAT TCGCTGGCTG GCTAAGCTAA CCTTGGGCAG GATTGTTTCT TTGGTCCTTT
  GTTGGAATGC TGTGTAGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321230912	CHEV_4_101346966	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257300721					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101531558 () rs orientation: forward

Symbol	Name	Function Class
Rr596196	regulatory region 596196	403 bp proximal
Rr596197	regulatory region 596197	1306 bp proximal