rs257208563 SNP Detail

Summary

• ID
  rs257208563
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115674648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acatgtggt cggctggccg gacacaacaG
  GTACACACAT ATAAGTAAAA ACAAAATAAA TATTTTAAAA GTAATACCGT GGTTTAAATT
  TTCCTTAGGT TCAGTAAATG AAACCATCAT TTCCTGTCTT TTGGTTTTGT TTCTGGTTTT
  R
  GTTTTGTCCT GGGCCTGAGT TTGTCCTTCA TCTCAAGCCT TATCTTTATG TCTCTTGTTC
  CAAGGCAAAA GAAAAATATT TCCCCGTGTG ACTCTGTGCA AGTTCACTGA TGCCCTTGTG
  ACCTCCAGCA TTGCAAAGCT TTGGGAAGAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916395	CHEV_6_115647705	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257208563					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115674648 () rs orientation: forward

Symbol	Name	Function Class
Rr379973	regulatory region 379973	85 bp upstream
Rr637025	regulatory region 637025	1963 bp distal
Rr637026	regulatory region 637026	765 bp distal
Rr637027	regulatory region 637027	within coordinates
Rr637028	regulatory region 637028	1100 bp proximal
Rr637029	regulatory region 637029	1196 bp proximal
Rr637030	regulatory region 637030	1430 bp proximal