rs257181788 SNP Detail

Summary

• ID
  rs257181788
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:98594311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGTGTTCCC AAACTGGGTT CTTATATCCC
  TTGCTCTGGT CAACCAGGTT GCAGGGTTTC CTGTCCTCAC AGGAACGAAG TCCCTAAAGA
  AACAGTGGCA GCCAGGTTTA GCCCCGGAAT TGACTGGATT CCTTTTTTAG GGCCCTGCTG
  K
  CCTGGAAGTT GGAGTGGGGG GCAGAGGAGG CAGGAGGAAG CCTGGGGGGG GGGTTGGCAT
  GGAGGGAGGC CTTCCCATCC ACCCTCACCC TCCACCCCAC CTGTCACTAT AGCCAAGCTT
  GCGGATAATA AAGTGTGGTG TTCCAGTACG                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323827314	CHEV_11_98564799	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257181788					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:98594311 () rs orientation: forward

Symbol	Name	Function Class
Csf3	colony stimulating factor 3 (granulocyte)	mRNA-UTR
Gm38985	predicted gene, 38985	1895 bp upstream
Med24	mediator complex subunit 24	1112 bp downstream