rs257116187 SNP Detail

Summary

• ID
  rs257116187
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156445507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GACCTGAAG TCCCTCCCTA GAGCAGATGG
  ACCATGTCTA GATATCTCCC TGTATATTGA CAGTTGTCAG TGCGGAACTT TGGTTCATCA
  CATTTAAAGA GACATGCAGT GTAAACCGAG CTATGTGTGG CCCCAGGGGG CTTGCTGCTC
  M
  TCTCTAATAG TGCCTGCTGT GAGTTTGCAA GCCACACATT ATCCTTCAGC AAACCTTTTG
  TTGTGTGCTG GGTAgtttgt ttggagatgg ggtcttgcta tgttgtgctt atgtgatgtg
  ggacttaaca tcctcctccc ttagcctctg                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320072535	CHEV_1_158548068	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257116187					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156445507 () rs orientation: forward

Symbol	Name	Function Class
Abl2	ABL proto-oncogene 2, non-receptor tyrosine kinase	Intron
Rr421203	regulatory region 421203	1524 bp distal
Rr421205	regulatory region 421205	388 bp distal