rs257087270 SNP Detail

Summary

• ID
  rs257087270
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13265663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAGGGGA GGAGGGAAGG
  AGACTTTCAG TGGGCTGTGA CAACTGGTAT TCCCTTCACT TCTTTTCTGC CCTGCCTCCT
  TGAGTGTCCT GGGCTACTTA GATGTCCGGC CACATTGTAT CACCACTGAA GTAGCAAGTC
  ACCCAAGTGT GGCCTTGACA CATACTAGAA GAACCTGTCC ATCTCTGGCT AAGAGTTAAC
  M
  TCAACAAAAG GGTTGTTAGA TGATGTTAAA TGTTGCTGAT AAAACTGTTG GTGAGGGCTG
  GTGAGATGGC TCAGCGGTTA AGAGCACTGA CTGTTCTTCC AGAGGTCCTG AATTCAATTC
  CCAGCAACCA CATGGTGGCT CACAACCACC ATAATCAGAT CTGAAGACAG CTACAGTGTA
  GTTACATATA ATAAAGAAAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505155	CHEV_8_13215663	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257087270					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13265663 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	1583 bp upstream
Rr368495	regulatory region 368495	1827 bp downstream
Rr368496	regulatory region 368496	1490 bp downstream
Rr659888	regulatory region 659888	1140 bp distal
Rr659889	regulatory region 659889	1539 bp distal
Rr659890	regulatory region 659890	808 bp proximal