rs256821577 SNP Detail

Summary

• ID
  rs256821577
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:13602603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATGAAATC CCCAAAGAGT
  TAAAAGAAAA ATAATATGGC AAATCATCCA GAAAAATCCG AAAATGGAAA AACCTGGTAT
  CACAAAATAC CAGAGATGAG TGTCTCTAAG TTTAAATGCT GAAAGGATGA AGAATGTAAG
  CTCAATCATT GCAGTGAAAA GCACAGAAAG TCTCCTGCAA ATTCTCCCAC GATGCAGAAA
  W
  GGTTTCCACC TCTCAGTTAC TGAAAGTCCA CTAAAATAAA TGTCAAGAAA AGGATCAGTT
  ACCAGGCAAA TAAAAAAACA TGCAAAAGCA ATTGGATTTT GGGGAGTTTC CAATGAAGAG
  AAAAATAACA ATACTGAAAA AATGATTAAG TTTGGAATAG CTAGAAAAGA CTTCATTCTC
  AGGTCGATAA TGAGCATGGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321748395	CHEV_6_13552604	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256821577					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13602603 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr626572	regulatory region 626572			642 bp distal
Tmem168	transmembrane protein 168			Coding-Synonymous
				Intron
				Noncoding-Transcript-Variant