rs256673111 SNP Detail

Summary

• ID
  rs256673111
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143755265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTGTTTT TTTGTTTTTT
  TGGGTTTTTT TTTTTTTTTT TTTTTTGGTT TGGTTTTTGA GACAGGGATT CTCTGTGTAG
  CCCTGGCTAT CCTGGAACTC ACTCTGTAGA CCAGGCTGAC CTCGAACTCA GAAATCCACC
  TGCCTCTGCC TCCTAAGTGC TGGGATTAAA GGCATGTGCC ACCACTGCCC AACCCATTTA
  Y
  CTTTATTTTA TTGTTGTTTT TTGTTTTCTC TTGTTTGAAA CAGGGTTTCT TTGTGTAGCC
  TTGGCTGTCC TGGAACTCAC TTTGTAGACC AGGCTGACCT TGAACTCAGA TATCAGCCTG
  CTTCTGCATC CCAAGTGCTG GGATTAAAGG TATGCACCAC CACTGCCCAT CTCTACAAGG
  TTCTTAACTA TCCTTTAGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CBA/J	DBA/1J	I/LnJ	MOLF/EiJ	NZO/HlLtJ	SPRET/EiJ
ss363578996	MGP_WTSI_4_143618598	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CBA/J	DBA/1J	I/LnJ	MOLF/EiJ	NZO/HlLtJ	SPRET/EiJ
rs256673111					SNP	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss363578996	MGP_WTSI_4_143618598	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143755265 () rs orientation: forward

Symbol	Name	Function Class
Rr604215	regulatory region 604215	663 bp distal