rs256595969 SNP Detail

Summary

• ID
  rs256595969
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:156959774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATCCGTTA GTGCAGATCC AGGGTATCCA ATGGCTTATT
  CTCACCTCTG TACCAGGCAC GAAAGTGATC ACACACATGT GCATTCAGGC AACACTTATA
  S
  AAAATAAAAT ACATAATTTT AAAAATCCTG TGAAATTGGA TCTGGGAAAT AATTTTCTTA
  AAAAGTGTGA AACAGAATCT AGGAAGATTC ATTATATAT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320584287	CHEV_2_156943590	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256595969					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156959774 () rs orientation: forward

Symbol	Name	Function Class
Rr568436	regulatory region 568436	570 bp distal
Rr568437	regulatory region 568437	706 bp distal
Rr568438	regulatory region 568438	305 bp distal
Rr568439	regulatory region 568439	1177 bp proximal
Samhd1	SAM domain and HD domain, 1	Intron
Tssr27144	transcription start site region 27144	1738 bp downstream