rs256294404 SNP Detail

Summary

• ID
  rs256294404
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135434767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGGGGTTC ACAGCTAACA AAACCTCAAA
  TCACTGTCCT TGGTACATAT CTGTATTGTT TCAAACAAAC TTGGATGTCA ACTAGCAAGG
  CTGCCCTAGT GACTTCATTT GTGTGTCCCC AAGAGTCCCC AGAGTCACCA ATCTGACAGG
  M
  GGTCTTTGCA AGCACCTCTG GGacacacac acacacacac acacacacac acacCTACCT
  CTCTGGGGTT TCCCTACAAT GATGTTTGAC CACATCACTG AGCCCAGAAG CAGAACAAAT
  GCACATGCGT GAGGGCGGTC AGAGCACGGG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321352841	CHEV_4_135263371	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256294404					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135434767 () rs orientation: forward

Symbol	Name	Function Class
Ifnlr1	interferon lambda receptor 1	mRNA-UTR
Rr602109	regulatory region 602109	1066 bp distal
Rr602110	regulatory region 602110	1501 bp proximal
Rr602111	regulatory region 602111	1570 bp proximal
Rr602112	regulatory region 602112	1782 bp proximal