rs256082067 SNP Detail

Summary

• ID
  rs256082067
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:115584514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCATTTTGA GCCAGCAGTG
  TTACAGCTGC TGACCAGGTG ACCTGGTGAG CTCTGGTAGT GTGATTCCAG TCAAGGCTCC
  CAGCAGGCCT GCCCCTGCCT CACCCCACAC AGAGCTACCT TCCAATCTCC ACTTAACATG
  AGCTTGAGAA CTCTGCCCTC CCTCAGCTGT GTCTGTGTCT CCTGTCTCTC TGCTTCCCCA
  S
  CCTTCAGCCT TCACTCGGAA GATTTCATCA GTGTGACTAA CGCCACTTGT CCTGTCCTTT
  ATAGGCCTTA GTAAGAGCTG CACTCAGGGG AGCCTGAATA AAGCTGTGCT GAGCGGAGCA
  GTTCACACTG CACCCACTCA TTTAAAAGTG ATGTCAGCCT TCTGTTACTA CAAAGGCAGT
  TATATAATAT GTTCACAGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916312	CHEV_6_115557571	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256082067					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115584514 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm44157	predicted gene, 44157			617 bp upstream
Mkrn2	makorin, ring finger protein, 2			Intron
				Noncoding-Transcript-Variant
Rr637005	regulatory region 637005			within coordinates
Rr637006	regulatory region 637006			1681 bp proximal
Rr637007	regulatory region 637007			1757 bp proximal