rs256054253 SNP Detail

Summary

• ID
  rs256054253
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89163158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACACACACA CACACACACA
  Y
  AGAAAAAGGA AAAAGTGAAG GAGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320836913	CHEV_3_89059773	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256054253					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89163158 () rs orientation: forward

Symbol	Name	Function Class
Rr580006	regulatory region 580006	1853 bp distal
Rr580007	regulatory region 580007	841 bp distal
Rr580008	regulatory region 580008	562 bp distal
Rr580009	regulatory region 580009	400 bp distal
Rr580010	regulatory region 580010	304 bp proximal