rs255986934 SNP Detail

Summary

• ID
  rs255986934
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:113071944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGAAGAA TCATTTAAAT TATAATGAAT
  CAATAGAACA GTGCTACAGT ATCATTGAAG AAGTACATAT TTAAATATGG TCACGTTAAA
  TATCAAAACC AGTTTACAAA ACCAGTCAGA CTATTCCTTT TCTCTTTTAA GAGGATACAC
  R
  AGAATTTTAC TTCTGTTTTT TATGTTCTTC TAATGATAGG TTTtttgttt gtttgtttgt
  ttgCAATATA TAgtatcact gtgtggctct agtcagcctg aaacttggta tgtagactaa
  ccttaaactt agaaaaagtc tttgtctctt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321909803	CHEV_6_113044977	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255986934					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113071944 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr636457	regulatory region 636457			1939 bp distal
Rr636458	regulatory region 636458			1901 bp distal
Setd5	SET domain containing 5			Intron
				Noncoding-Transcript-Variant