rs255905469 SNP Detail

Summary

• ID
  rs255905469
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149223524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA GACAGCTACA GTGTACTTAC
  A
  TATATAATAA ATAAATCTTT AAAAA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321425015	CHEV_4_148513176	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255905469					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149223524 () rs orientation: forward

Symbol	Name	Function Class
Cenps	centromere protein S	1467 bp upstream
Cpgi15320	CpG island 15320	1246 bp distal
Rr398863	regulatory region 398863	1262 bp downstream
Rr604839	regulatory region 604839	1509 bp distal
Rr604840	regulatory region 604840	1024 bp distal
Rr604841	regulatory region 604841	1411 bp distal
Tssr44623	transcription start site region 44623	1472 bp upstream
Tssr44624	transcription start site region 44624	1442 bp upstream