rs255833626 SNP Detail

Summary

• ID
  rs255833626
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109376762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAATGGGC TCAGATAAGC
  TAAGTAACTT ACCCAGATCA CTCAAGTATG AAATGTTGAA GTCATTCTTC TAGTGCCCAG
  TCACAAGATT CTAAAACCTG TGTTCTTTTT TTTTTTTTTT TTTTTTTTGT TGATATAACA
  TTCTACTTCT ATGTTAGGCA AAGAGATAAG GGTCTAAGAG GGCTACTGAC AAGACCCGGA
  G
  TTTGGAGATA CTGTTTCCAG ATTCCTAATA GCATAAAGAG ATGGTAGATA GTGCAGAATT
  CTATTACAAA TTTCCCATCT TCAAGCAAGT GTTTTGATGA GGGATTACAA GTTGTTCTTA
  TCCATGTCTT GAGGAATCCA GATTTCTAGC TGTAAGTCAA AGAATGGGAT CTGAGTCACT
  CCTTGAGTCA CTGCCAGGGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320869324	CHEV_3_109272364	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255833626					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109376762 () rs orientation: forward

Symbol	Name	Function Class
Rr583417	regulatory region 583417	1812 bp distal
Rr583418	regulatory region 583418	1863 bp distal
Rr583419	regulatory region 583419	105 bp proximal
Vav3	vav 3 oncogene	Intron