rs255780672 SNP Detail

Summary

• ID
  rs255780672
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13150465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATATGTGT TTCCTAACTT
  TAATCTCTCA AGTTCAAACA CTCTGAGGGC AATGTTTCTT ACCATAAAGA AAATAAAAGG
  TCAGACTGTA AACTCATTGA GCATACCTAT TTCATCTGGA ATGATAATAT TTTGGTTTTG
  TATTGATGCT TTAATTTAGA GAGATGAGTC TCAGATGAAA TATAAAAAAA TAATTGACCT
  R
  TCTCAAGAAA GGTTTTAAAA AGTCTCCTCT TTGCACTATC TCCCTACCTA TTCAGTATAG
  TACTCAAAGT CCTAGCCAGA GCAATTAGAC AACAAAAGTC AAAGGGATAC AAATTACAAA
  GGTTAAGTCA AAATATCACT ATTTGCAGAT GATAAGATAG TATACTTAAG TGACCCAAAA
  AATTCCAACA GAGAATTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747155	CHEV_6_13100466	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255780672					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13150465 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	1734 bp proximal
Rr626557	regulatory region 626557	1979 bp proximal