rs255760727 SNP Detail

Summary

• ID
  rs255760727
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52814922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTCACCCC TTCAAGAACT
  CTTTCAGAGC TTTCCCCATG AACCCTTTGG GCTGTAGCCA CTAGGGGTCA GTAATATCTC
  CTGGCCAACT TTGCCAACTG AGCATACACC CTTGGGTTTG ACACTAATAG AAGAGAAAAG
  GAAAAGTCTA GAACAACAAG TAAAGCCCCA CCCAACCCCC CAAAAAGAAG AATTCTAAAA
  Y
  TTCATTTAGA AAGCAAATAA TTAAAAACAT CAAATAAACA AACAAATCAA AACAAAAACA
  ACCTAACCCC ACACACAGCC TGCAAAGCAC AAAGGCCATT TTATAAGAGC TGATTTAGGC
  CATGGTTAGA CGGGTTAGAA CTATTCCAAG AGCAGTGGTG GAGCTTGGGG CCACTTGGAG
  CTGGTGCTTA ATAGCCCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765872	CHEV_3_52711423	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255760727					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52814922 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	within coordinates
Rr576600	regulatory region 576600	65 bp distal
Rr576601	regulatory region 576601	126 bp distal