rs255667434 SNP Detail

Summary

• ID
  rs255667434
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:67394796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGGTAAC AAGTCCAAGA
  AGTTTGTGCA TGGCTTGTTC TGGAAATCAA ATAATAATTC TCACTCTGTC TGTCTGTCTG
  TCTGTCTGTC TGTCTGTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCCC TCTTTCTTCT
  CTCTTATTTT TCTCCCTTCC CTCCCTCTCT CCCTCCCTCT CTTCCTTTCT AAAAAGGTAA
  G
  TGAAGAAAAG AGTGGTGTTG ATTGCAAAAA CAATCGAGCC CCTTAATAAC TAGCAACATG
  AATAACAGCA TAGAAATAAA AAGAAAGGAT CATACCGAGT AACAAAGTCA TTTTTATCAG
  AAAATGATGT AGCTATGATT TTTTTCTTTT AAAAACACTC ACAAAAAGCA TTGTGAGGTG
  ACTTTTACTG TCTCCATTGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320326795	CHEV_2_67402509	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255667434					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:67394796 () rs orientation: forward

Symbol	Name	Function Class
B3galt1	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	1419 bp upstream
Cpgi11705	CpG island 11705	669 bp proximal
Rr558220	regulatory region 558220	415 bp proximal
Rr558221	regulatory region 558221	1431 bp proximal
Tssr18010	transcription start site region 18010	1228 bp upstream