rs255618485 SNP Detail

Summary

• ID
  rs255618485
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:109136188 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACAGGCAG GACAAAGGCC TTCATTTAAG
  CATATACTAT AATGTTATGG TGTTAAAATA CATATATATT AAAAAATCTC TGCCACTGGT
  GAGCTGAGGG GGGTGGTTAG ACTTATGTAA ACAGGTCATT AGGAGGTTGT TGCCCTCTTC
  C
  AGTAAAGTCA ACAAAAGAGT ATGAACACTA GTTTGGAGAG ACAATACTCT GTCAAGAGGT
  GGCATTTATG ACAAAAAGGA ATTTGAGAGG aaccgggcac tggtggcaca ttcctttaat
  ctcagcactt gggaggctga ggcaggcaga                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321253760	CHEV_4_108951596	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255618485					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109136188 () rs orientation: forward

Symbol	Name	Function Class
Eps15	epidermal growth factor receptor pathway substrate 15	1277 bp upstream
Gm40225	predicted gene, 40225	within coordinates
Rr398389	regulatory region 398389	1018 bp upstream
Rr597299	regulatory region 597299	646 bp proximal
Rr597300	regulatory region 597300	1141 bp proximal
Rr597301	regulatory region 597301	1432 bp proximal
Rr597302	regulatory region 597302	1454 bp proximal
Rr597303	regulatory region 597303	1779 bp proximal
Tssr38334	transcription start site region 38334	1275 bp upstream
Tssr38335	transcription start site region 38335	1325 bp upstream
Tssr38336	transcription start site region 38336	1374 bp upstream