rs255543567 SNP Detail

Summary

• ID
  rs255543567
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:102418774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCTAATT GATAAGATGG
  TAGGAAGTCC AAATACAAAA CTGCTTTCAG TAATAGATTA GGAGAGATGT GGGGTTCTGG
  AAATTGAGCT CAGCTAGTGA AGTGCTGGCC ACGTAAGCAT GAGGACCCAG GTTTGGTCTT
  TAGCACGTAT GTAAAGAGCT GGGCATGATG GTCAGGGGGA GTTGGAGACA AGTGGATCAC
  R
  GAGATTGTGG ATGGCCAAGC TTAATCAACT TGGTGAGTGT CAGGCCAAGC ATAGACACAA
  ACAAACAAAC AAACAAACAA ACAGCCAGGA CAGACAGACA AGCAAACAAA GATAGAAAAT
  ATCTGAGAAA TGACATTCAA GCTGCTCTGA TATCCATACA CATGAGATTC ATAAGCATGT
  ATGTACACAC ACACACACAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320439069	CHEV_2_102428586	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255543567					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102418774 () rs orientation: forward

Symbol	Name	Function Class
Pamr1	peptidase domain containing associated with muscle regeneration 1	Intron
Rr373606	regulatory region 373606	within coordinates
Rr561706	regulatory region 561706	1530 bp proximal
Rr561707	regulatory region 561707	1762 bp proximal