rs255380199 SNP Detail

Summary

• ID
  rs255380199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16364247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAAAAGAG ATATCAAAGG
  CTTTTTAGAA TTTAACAAAA ATGAGCCCAC AATATACCCA AACTTATGGG ACACAATGAA
  AGCAGTGGTA AGAGGAAAAC TCATAGCTCT AAGTGCCTCC AAAAAGAAAC TTTAGAGAGC
  TTACACTAGT AGCTTGACAG CACACCTGAA AGTTCTAGAA CAAAAAAGAA GCAAATACAC
  Y
  CAAGAGGAGT AGACATCAGG AAATAAGTAA ACTCAGGGCT AAAATCAACC AAGTAAAAAC
  AAAAAGAACT ATACAAAGAA TCAACAAAAC GAGGAGCTTT TTTTTTTTTT TTTTTTTTTG
  AGGAAATCAA CAAGATAAAC CCTTAGCCAG AGTAACCAGA GGGCACAGAG ACAGTATTCA
  AAGTAATAAA ATCAGAAATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320671136	CHEV_3_16210083	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255380199					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16364247 () rs orientation: forward

Symbol	Name	Function Class
Rr573795	regulatory region 573795	874 bp proximal
Rr573796	regulatory region 573796	950 bp proximal