rs255363877 SNP Detail

Summary

• ID
  rs255363877
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107493312 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCAGCCAT GCTAGATGGC
  ATACTCAGGC CTTCTCTGTC ATCTAGAGAC ACCTCAGTTA CCCCAATATG TAAGTCCTTC
  CCAAAGTCGA GAAGACAGTT GCTCTTCTAT GTTCTGCTGT TCTGGGAGTC CGGGGCCCTC
  TGGTGTCGTA GCCAATGAAA CACCAGCATG GTTCACAGGG TCACACCCGG GCCCCTGCAG
  W
  CGTCTTGCAG TATTACACAG TCTTCATCCA TCCCACACTC CTGGATTGGA GGCAGCTCCT
  GGTTGTCTTG CTAACATGAG ATGAACTTAT AGCTGCCTTC TCCCATGACT GCAACAATGT
  CTTTCATCAC AGTTGTCCTT GCGTAAGAGA GCCACTTGTC CCGTTGTGTA GACTGAGGAA
  CAGAGAAGGT ACAGTCACAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321249701	CHEV_4_107308720	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255363877					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107493312 () rs orientation: forward

Symbol	Name	Function Class
Glis1	GLIS family zinc finger 1	1054 bp downstream
Rr597028	regulatory region 597028	1297 bp distal
Rr597029	regulatory region 597029	1652 bp proximal
Rr597030	regulatory region 597030	1748 bp proximal