rs255357304 SNP Detail

Summary

• ID
  rs255357304
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109286457 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGTTGTCC CAGTCAGTCT
  TTTCAAGTGA CTTCCTATAC GTCATCTCAC TTTTGAAAAC CAGCATAACT TTCCCTCTCT
  CATTGGCTTT AAAAAGACTA CCCTTTGTTA CATATTAAAC CTTTACGTTC CTGACTTCTA
  GCTCTACAAC CTTGATTCTC TTTCTTTGAA TTTTTTGTCT CATTTTGAAG TCTCACTTGG
  R
  GATCAAACCA AACCATGGCT CATTGTGATT TTTGTGATGG TTTGAATGTT AAGAGATTAT
  TTTTACACAC GTATAGCAAT GAATGCTCTA TAGATTTCTG TGTAAGTTAT TCTACTATTT
  GTGTGTTTAC ATGCAAATAT AGTAAAATAT GCCTGCAATA TTTTGTAATA TTTAGAGGAA
  ATTATACAAC ACGTGTACGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320868597	CHEV_3_109182059	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255357304					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109286457 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr583413	regulatory region 583413			77 bp distal
Tssr31292	transcription start site region 31292			1530 bp upstream
Vav3	vav 3 oncogene			Intron
				Noncoding-Transcript-Variant