rs255352953 SNP Detail

Summary

• ID
  rs255352953
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121278004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTT AAATTCATTT CCTTCATCCC
  S
  GTGTGTGTCT TTAGAGAACA ACTTT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320483205	CHEV_2_121273259	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255352953					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121278004 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12159	CpG island 12159	1282 bp proximal
Gm75262	predicted gene, 75262	within coordinates
Rr397250	regulatory region 397250	1592 bp upstream
Rr563824	regulatory region 563824	750 bp proximal
Rr563825	regulatory region 563825	853 bp proximal
Rr563826	regulatory region 563826	1182 bp proximal
Serf2	small EDRK-rich factor 2	1675 bp upstream
Tssr19771	transcription start site region 19771	1839 bp upstream